Open Notebook

This site is to serve as my note-book and to effectively communicate with my students and collaborators. Every now and then, a blog may be of interest to other researchers or teachers. Views in this blog are my own. All rights of research results and findings on this blog are reserved. See also http://youtube.com/c/hongqin @hongqin

Sunday, March 29, 2026

github.com/bioc

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  github.com/bioc is a github org with all bioconductor software, one repo per package.  
Friday, March 27, 2026

pennAITech funding statement

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  As a reminder, for any presentations or publications showcasing your pilot work,  please make sure to include a funding acknowledgment :  ...
Tuesday, March 24, 2026

WebAssembly inside a Transformer; “computers inside transformers”

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 The work you’re referring to is a very recent research direction (2025–2026) associated with Christos Tzamos and collaborators, often dis...

openai life sciences

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  https://openaifoundation.org/news/update-on-the-openai-foundation At the Foundation, we’ve identified three initial focus areas where we t...
Saturday, March 7, 2026

DNABERT waterfield

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  todo: DNABERT2 • DNABERT is installed.   - Found repo: https://github.com/jerryji1993/DNABERT.git   - Cloned to: DNABERT (commit b6da04e ...
Tuesday, March 3, 2026

waterfield GPUs

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  GPU Inventory Summary GPU Type Partition Total Nodes GPUs per Node Total GPUs NVIDIA RTX P6000 rtxp6000flex-1 30 1 30 rtxp6000flex-2 12 2 ...
Thursday, February 19, 2026

modern's mrna flu vaccine

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  The story of Moderna's mRNA flu vaccine (mRNA-1010) has recently shifted from a regulatory stalemate to a potential path forward, larg...
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