Nedelec lab, EMBL
http://www.cytosim.org/
Showing posts with label computational cell biology. Show all posts
Showing posts with label computational cell biology. Show all posts
Thursday, July 13, 2017
Monday, April 8, 2013
VCell exercise note, the beginner version
Start VCell and login.
To create a new model, choose File->New-Biomodel,
In the structure diagram menu, click "species" icon, and use the 'arrow' to add a reaction.
Click reaction, and more window will show.
Right click a parameter that I want to change, 'Kf', and a window will show.
Right click 'Application' to add a new one.
Under "Parameters and Functions", we can specify them again.
Under Simulations, click to add a new simulation.
Click the edit icon (a notepad with pencil) to edit the simulation,
Then click "Run", the green arrow.
Use Frap
Choose the two
To create a new model, choose File->New-Biomodel,
In the structure diagram menu, click "species" icon, and use the 'arrow' to add a reaction.
Click reaction, and more window will show.
Right click a parameter that I want to change, 'Kf', and a window will show.
Right click 'Application' to add a new one.
Under Simulations, click to add a new simulation.
Then click "Run", the green arrow.
Use Frap
Choose the two
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