Thursday, August 5, 2021

bat coronaviruses at genbank

 RaTG13 

https://www.ncbi.nlm.nih.gov/nuccore/1916859392

 

A list of bat coronaviruses in GenBank

https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=2664420&lvl=3&keep=1&srchmode=1&unlock

Interestingly, I did not see RaTG13 in this list. 

 

I would prefer GenBank file because they provide annotations. The GISAID fasta files is hard to parse ORFs. 

 

No comments:

Post a Comment