Pando lineage

LB notes: 

 

Here is a link to a quick program that shows all of the pango lineages in GRA submissions for the updated GISAID variant surveillance dataset. There are 199 unique pango lineages out of all GRA submissions.

 

https://github.com/QinLab/LB-clade-fitness/blob/main/GRA_lineages.ipynb

 

Also, here are a couple links that might explain some of the unexpected ones:

 

https://virological.org/t/pango-lineage-nomenclature-provisional-rules-for-naming-recombinant-lineages/657

 

https://www.who.int/activities/tracking-SARS-CoV-2-variants