ts117 usage

 module load sge 

$ module load  sge/2011.11p1

For local R package installation, it seems to go to 

info  man

-bash-4.2$ ls /cm/shared/apps/R/R-3.4.3/share/info/

I ran R/3.5.3 

install.packages('tidyverse') # it went to /cm/shared/apps/R-3.5.3

ts job run, yeastPIN ms02 Dang 0.001 percentile ~ GO

Modified based Guo's example script for ts.
ts does not have 'foreach' and 'doMC' libries, so I have to remove them in R script.


-bash-4.2$ cat ts_yeastPIN_job1.pbs  
#!/bin/bash -l
#$ -S /bin/bash
#$ -N yPIN.Dang.001.col4
#$ -cwd

. /etc/profile.d/modules.sh
module load shared
module load R/3.4.3

cmd="R -f yeast_Zscore_GO-DangCR.R"

$cmd
-bash-4.2$



-bash-4.2$ qstatus -a
Running jobs:

job-ID  # name                      owner      submit time        
------------------------------------------------------------------
 8276  1 yPIN.Dang.001.col4        hqin       01/14/2019 10:15:40