Day 1, bio125 20160113Wed, section 3 and 4

List of things: 
Names tags,
Syllabus, Learning objectives
Pre-survey on computing thinking: 
https://docs.google.com/forms/d/1g3hrO8QtbAGcW3h2Oh-PcRr-OlmnTAoCXw71iSeiHrM/viewform
preclass knowledge assessment

APE installation
R/Rstudio installation, data analysis

Socractive

Notebook

Past student presentations
Assignment due before class

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Section 1
=> Dynamic books, access code problem
=> Names tags,
=>How to find upcoming assignments on Moodle?

=>Syllabus, flipped classroom, assignments are mostly due before class, 

Learning objectives
Use a seat map to connect student names, faces and seatings.

9:25
=>Signatures, notepad and pens
=>IRB, academic integrity, photo video release form (Need to add Yes or No on the form)

9:34 
=> computing survey

Emails the link through the commons news forum for unregistered students. 

9:45=>pre-assessment

10:06

=> Download ApE. About 2 students do not have laptops. 

ApE installation. On Yosemite, when the security setting is not changed, OS X gave a warning as if the downloaded software is damaged.

On some windows computer, ApE download as a ZIP file and have to be extract. 

by 10:42, R Rstudio. R has to be run directly on Spelman HP laptops. 

10:50am, recall names and ended the class. 

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Section 2
1pm
=> Dynamic books, access code problem
Problem: No assignments can be seen on your textbook. 

13:16 
=> Names tags,
Use a seat map to connect student names, faces and seatings.

by 1:30
=>Syllabus, flipped classroom, assignments are mostly due before class, 

Learning objectives
grades, past exam, assignment due before class. 

** Use the past exam average to explain assessment, and how it can be helpful to improve teaching and learning strategies. 

1:30 =>Signatures, notepad and pens
=>IRB, academic integrity, photo video release form (Need to add Yes or No on the form)

=> computing survey

Emails the link through the commons news forum for unregistered students. 

13:55
=>pre-assessment

14:03

=> Download ApE. About 2 students do not have laptops. 

14:19 
=>R Rstudio. R has to be run directly on Spelman HP laptops. 

=>How to find upcoming assignments on Moodle?

2:40pm. Recall names and ended the class. 

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Reference:
http://hongqinlab.blogspot.com/2015/01/bio125-day-1-week-1.html
http://hongqinlab.blogspot.com/2014/01/bio125-day-1-jan-16-thu-spring-2014.html

Left for Day 2

=>lab safety form (I added the students names to the list).

Socrative login. Go over slides to test socrative. (students have trouble to generate account. Later, I figure out that students names are only available in pre-defined quizzes).

=> Past exam

=> Pubmed

=> Socrative

HP laptop log, wireless connections
Bring ethernet cables 

Presentation orders. natural group order

Did Group building on cancer. 
PubMed search
Primary literature: original work versus reviews and commentaries.
group 1, 2: colorectal cancer, MSH2
group 3: breast cancer, BRCA1
group 4; leukemia,
group 5: oral cancer, smoking, alcohol PMID 25564114
group 6: ovarian cancer: BRCA1 and 2
group 7: prostate cancer:
group 8: stomach cancer
group 9: pancreatic cancer
group 10: liver cancer

ToDo for Friday: R code for math assignments. 

Summary: presentation groups of next class on homework assignments.