reference:
https://www.ibm.com/support/pages/downloading-data-ncbi-command-line
conda create --name aspera
conda active aspera
-bash-4.2$ wget https://d3gcli72yxqn2z.cloudfront.net/connect_latest/v4/bin/ibm-aspera-connect-3.11.2.63-linux-g2.12-64.tar.gz
--2021-06-24 12:32:34-- https://d3gcli72yxqn2z.cloudfront.net/connect_latest/v4/bin/ibm-aspera-connect-3.11.2.63-linux-g2.12-64.tar.gz
Resolving d3gcli72yxqn2z.cloudfront.net (d3gcli72yxqn2z.cloudfront.net)... 13.249.125.124, 13.249.125.227, 13.249.125.202, ...
Connecting to d3gcli72yxqn2z.cloudfront.net (d3gcli72yxqn2z.cloudfront.net)|13.249.125.124|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 38715569 (37M) [application/gzip]
Saving to: ‘ibm-aspera-connect-3.11.2.63-linux-g2.12-64.tar.gz’
100%[===========================================================================================================================>] 38,715,569 80.1MB/s in 0.5s
2021-06-24 12:32:35 (80.1 MB/s) - ‘ibm-aspera-connect-3.11.2.63-linux-g2.12-64.tar.gz’ saved [38715569/38715569]
-bash-4.2$ ll
(aspera) -bash-4.2$ sh ibm-aspera-connect-3.11.2.63-linux-g2.12-64.sh
Installing IBM Aspera Connect
Deploying IBM Aspera Connect (/home/hqin/.aspera/connect) for the current user only.
Install complete.
(aspera) -bash-4.2$ cd /scr/hqin/gtex/
(aspera) -bash-4.2$ ls
(aspera) -bash-4.2$ /home/hqin/.aspera/connect/bin/ascp -QTr -l 300M -k 1 -i /home/hqin/.aspera/connect/etc/asperaweb_id_dsa.openssh -W private-key-here dbtest@gap-upload.ncbi.nlm.nih.gov:data/instant/hongqin/82927 .
Release_Notes.phs000424.GTEx.v8.p2.MULTI.pdf. 100% 432KB 5.0Mb/s 00:00
Study_Report.phs000424.GTEx.v8.p2.MULTI.pdf.n 100% 94KB 5.0Mb/s 00:00
manifest_phs000424.GTEx.v8.p2.c1.GRU.pdf.ncbi 100% 43KB 5.0Mb/s 00:00
phs000424.v8.pht002740.v8.GTEx_Subject.data_d 100% 1200 5.0Mb/s 00:00
phs000424.v8.pht002740.v8.p2.GTEx_Subject.MUL 100% 6000 5.0Mb/s 00:00
phs000424.v8.pht002740.v8.p2.GTEx_Subject.var 100% 3264 5.0Mb/s 00:00
phs000424.v8.pht002741.v8.GTEx_Sample.data_di 100% 992 5.0Mb/s 00:00
phs000424.v8.pht002741.v8.p2.GTEx_Sample.MULT 100% 271KB 5.0Mb/s 00:01
phs000424.v8.pht002741.v8.p2.GTEx_Sample.var_ 100% 2032 5.0Mb/s 00:01
phs000424.v8.pht002742.v8.GTEx_Subject_Phenot 100% 89KB 5.0Mb/s 00:01
phs000424.v8.pht002742.v8.p2.GTEx_Subject_Phe 100% 293KB 11.2Mb/s 00:01
phs000424.v8.pht002742.v8.p2.c1.GTEx_Subject_ 100% 197KB 11.2Mb/s 00:01
phs000424.v8.pht002743.v8.GTEx_Sample_Attribu 100% 26KB 11.2Mb/s 00:01
phs000424.v8.pht002743.v8.p2.GTEx_Sample_Attr 100% 124KB 11.2Mb/s 00:01
phs000424.v8.pht002743.v8.p2.c1.GTEx_Sample_A 100% 3617KB 23.6Mb/s 00:02
phg000219.v4.GTEx_Pilot_Illumina5M.genotype-c 100% 698MB 292Mb/s 00:24
phg000219.v4.GTEx_Pilot_Illumina5M.genotype-o 14% 5337MB 290Mb/s 15:44 ETAc
......
(aspera) -bash-4.2$ Completed: 1448373288K bytes transferred in 40722 seconds
(291366K bits/sec), in 59 files, 7 directories; 16 files skipped or empty.
No comments:
Post a Comment