Sunday, March 8, 2020

*** covid 19

https://github.com/CSSEGISandData/COVID-19/blob/master/csse_covid_19_data/csse_covid_19_daily_reports/03-20-2020.csv

https://www.gisaid.org/registration/register/

weather data,
https://ldas.gsfc.nasa.gov/data
GED DISC NASA
https://disc.gsfc.nasa.gov/datasets?page=1&subject=Atmospheric%20Temperature

1day ML2T: MLS/Aura Level 2 Temperature V004
https://disc.gsfc.nasa.gov/datasets/ML2T_004/summary

death, age information

sequences

https://platform.gisaid.org/epi3/frontend#5748f6

meta-information

https://nextstrain.org/ncov

communal transmission ~ weather

https://www.viprbrc.org/brc/vipr_genome_search.spg?method=ShowCleanSearch&decorator=corona


GFF-version 3 file, meta information can be downloaded
https://bigd.big.ac.cn/ncov/genome/accession?q=hCoV-19/USA/CA-CDPH-UC3/2020
https://bigd.big.ac.cn/ncov/

geospatial, weather ~ evolution rate?
spatial phylogeny (use weather data as landscape data? )?

cancer phylogeny
https://www.youtube.com/watch?v=rnx-UI3h0MU
pathTimMEx: mutually exclusive cancer pathways and their dependencies in tumor progression.

bioimage training, deep learning?
https://www.sirm.org/category/senza-categoria/covid-19/

COVIDbase
https://covidbase.com/7d1a6f8ef0b9434b87e68cbe05d8a9d6?v=1d23e01e433147edb0ee7b49474734eb

George town open research  covid19 data sets
https://pages.semanticscholar.org/coronavirus-research

academic data science alliance
https://www.academicdatascience.org/covid


Coronavirus Open Data Sources, CAD models and more


https://docs.google.com/document/d/1agNknLycm9o6UfFCW_5P-0RUuubwf4M-XoTQvQe4pnM/edit


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