[hqin2@greenfield ms02GINPPI]$ cat netaging.pbs
#!/bin/bash
# Request 15 cores
#PBS -l nodes=1:ppn=15
# Request 2:30 minutes of cpu time
#PBS -l walltime=7:00:00:00
module load R/3.2.1-mkl
echo hostname
pwd
cd /crucible/mc48o9p/hqin2/mactower-network-failure-simulation-master/ms02GINPPI
pwd
numactl -C +0 R --vanilla --slave -f net-aging-sim-20150915.R --args 95 95 0.02 1.0 50 &
numactl -C +1 R --vanilla --slave -f net-aging-sim-20150915.R --args 96 96 0.02 1.0 50 &
numactl -C +2 R --vanilla --slave -f net-aging-sim-20150915.R --args 97 97 0.02 1.0 50 &
wait
[hqin2@greenfield ms02GINPPI]$ qstat -u hqin2 -a
greenfield.psc.xsede.org:
Req'd Req'd Elap
Job ID Username Queue Jobname SessID NDS TSK Memory Time S Time
----------------------- ----------- -------- ---------------- ------ ----- ------ ------ --------- - ---------
2343.greenfield.psc.xs hqin2 batch netaging.pbs 44687 1 15 -- 168:00:00 R 00:03:56
[hqin2@greenfield ms02GINPPI]$ ll -t dipgin.ms02.output/9[567]/popages/*0.02*
-rw-r--r-- 1 hqin2 mc48o9p 848 Sep 14 19:26 dipgin.ms02.output/97/popages/cutoff.4.p.1.lambda.0.02.popsize.50.time.2015Sep14_192617.txt
-rw-r--r-- 1 hqin2 mc48o9p 845 Sep 14 19:26 dipgin.ms02.output/95/popages/cutoff.4.p.1.lambda.0.02.popsize.50.time.2015Sep14_192616.txt
-rw-r--r-- 1 hqin2 mc48o9p 846 Sep 14 19:26 dipgin.ms02.output/96/popages/cutoff.4.p.1.lambda.0.02.popsize.50.time.2015Sep14_192613.txt
[hqin2@greenfield ms02GINPPI]$ cat netaging.pbs
#!/bin/bash
# Request 15 cores
#PBS -l nodes=1:ppn=15
# Request 2:30 minutes of cpu time
#PBS -l walltime=7:00:00:00
module load R/3.2.1-mkl
echo hostname
pwd
cd /crucible/mc48o9p/hqin2/mactower-network-failure-simulation-master/ms02GINPPI
pwd
numactl -C +0 R --vanilla --slave -f net-aging-sim-20150915.R --args 95 95 0.02 1.0 150 &
numactl -C +1 R --vanilla --slave -f net-aging-sim-20150915.R --args 96 96 0.02 1.0 150 &
numactl -C +2 R --vanilla --slave -f net-aging-sim-20150915.R --args 97 97 0.02 1.0 150 &
wait
[hqin2@greenfield ms02GINPPI]$ qstat -u hqin2
greenfield.psc.xsede.org:
Req'd Req'd Elap
Job ID Username Queue Jobname SessID NDS TSK Memory Time S Time
----------------------- ----------- -------- ---------------- ------ ----- ------ ------ --------- - ---------
2344.greenfield.psc.xs hqin2 batch netaging.pbs 45653 1 15 -- 168:00:00 R 00:21:47
[hqin2@greenfield ms02GINPPI]$ qstat
Job ID Name User Time Use S Queue
------------------------- ---------------- --------------- -------- - -----
2344.greenfield netaging.pbs hqin2 01:07:54 R batch
/*Great. The Elapse time is 21 minutes but my CPU time is 3 times of it. So, I am running job in paralle. */
[hqin2@greenfield ms02GINPPI]$ ll -th dipgin.ms02.output/9[567]/popages/*txt
-rw-r--r-- 1 hqin2 mc48o9p 2.5K Sep 14 20:05 dipgin.ms02.output/95/popages/cutoff.4.p.1.lambda.0.02.popsize.150.time.2015Sep14_200529.txt
-rw-r--r-- 1 hqin2 mc48o9p 2.5K Sep 14 20:05 dipgin.ms02.output/96/popages/cutoff.4.p.1.lambda.0.02.popsize.150.time.2015Sep14_200528.txt
-rw-r--r-- 1 hqin2 mc48o9p 2.5K Sep 14 20:05 dipgin.ms02.output/97/popages/cutoff.4.p.1.lambda.0.02.popsize.150.time.2015Sep14_200527.txt
-rw-r--r-- 1 hqin2 mc48o9p 848 Sep 14 19:26 dipgin.ms02.output/97/popages/cutoff.4.p.1.lambda.0.02.popsize.50.time.2015Sep14_192617.txt
-rw-r--r-- 1 hqin2 mc48o9p 845 Sep 14 19:26 dipgin.ms02.output/95/popages/cutoff.4.p.1.lambda.0.02.popsize.50.time.2015Sep14_192616.txt
-rw-r--r-- 1 hqin2 mc48o9p 846 Sep 14 19:26 dipgin.ms02.output/96/popages/cutoff.4.p.1.lambda.0.02.popsize.50.time.2015Sep14_192613.txt
/*The three popsize.150 files are generated simultaneously. */
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