- Annotate ORF using APE
- Design PCR primers to amply a fragment that contains the mutation on msh2
- Analyzing PCR primer using ApE
- Protein structure visualization using SWISS PDB Viewer
- Translation from DNA to protein, Python
- Find Restriction Enzyme recognition sites, Python demo
Seletec Computing with R Videos
- A quick introduction to basic R usage (in RStudio)
- Serial dilution data analysis using R
- Standard curve analysis using R
- Flow cytometry data analysis, clustering, using R
- Convert Excel file to csv format, read into R and plot.
- Hierarchical Clustering by hclust in R on a distance matrix between four cities.
- Hierarchical clustering illustrated by Lady Gaga using hclust() in R.
- Retrieve and analyze a gene expression data set from NCBI GEO in R
- How to change R working directory in Windows
- How to use 'match' function in R, and How to use R match() function to merge different data sets
- Multiple regression and causal factor identification using R
- Introduction to epidemiology using the London Cholera example (simulation needs improvement)
- Make solution demo in Rstudio, BIO125, spring 2015
Animation on herd immunity