Monday, January 14, 2019

ts job run, yeastPIN ms02 Dang 0.001 percentile ~ GO


Modified based Guo's example script for ts.
ts does not have 'foreach' and 'doMC' libries, so I have to remove them in R script.


-bash-4.2$ cat ts_yeastPIN_job1.pbs  
#!/bin/bash -l
#$ -S /bin/bash
#$ -N yPIN.Dang.001.col4
#$ -cwd

. /etc/profile.d/modules.sh
module load shared
module load R/3.4.3

cmd="R -f yeast_Zscore_GO-DangCR.R"

$cmd
-bash-4.2$



-bash-4.2$ qstatus -a
Running jobs:

job-ID  # name                      owner      submit time        
------------------------------------------------------------------
 8276  1 yPIN.Dang.001.col4        hqin       01/14/2019 10:15:40

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