Wang, Li, Deng, Pan, BMC review on clustering methods for protein interaction networks.

Recent advances in clustering methods for protein interaction networks

Jianxin Wang1,2*, Min Li1*, Youping Deng3, Yi Pan2

From The ISIBM International Joint Conference on Bioinformatics, Systems Biology and Intelligent

Computing (IJCBS), Shanghai, China. 3-8 August 2009

http://www.biomedcentral.com/content/pdf/1471-2164-11-S3-S10.pdf

cited by
http://scholar.google.com/scholar?cites=16432683922097612422&as_sdt=5,43&sciodt=0,43&hl=en

Reviewed 20 clustering methods, including MCL. MCL is commented as the highly successful.

10. Brohée S, van Helden J: Evaluation of clustering algorithms for proteinprotein

interaction networks. BMC Bioinformatics 2006, 7:48.

63. Vlasblom J, Wodak SJ: Markov clustering versus affinity propagation for

the partitioning of protein interaction graphs. BMC Bioinformatics 2009,10:99.