meiofauna diversity, good topic for image analysis
reference: "multispecies coalescent delineate structure, not species. "
cytochrome oxidase subunit 1, phylogeny study
"cryptic diversity"
haplotype network show population structures, ototyphlonemertes duplex
spatial-phylo plot, which tool?
oil spill effect on meiofauna, population genomics study
global genomics initiative,
genome initiative workfow,
library prep, WGS, quality check. contamination genome, genome assemble.
Annelida
Nemertea
meta barcoding genes on 18S (nuclear) and COI (mitochondrial). however, 18S is not informative, COI lacks universal primers
Metagenomics, unknown pools of worms,
poor reference genomes
PALADIN: protein alignment for functional profiling whole metagenome shotgun data
assembled mitochondrial genomes from meta-genomes
signal strength in WGS: single cell organism versus multi cell organisms
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