For bio125 , paper PCR exercises
# Generate sequences for PCR paper exericses
library("seqinr");
list.files()
# Load plasmid pMSH2 sequence into R
seqs = read.fasta( "pMSH2.seq")
# look at the first sequence
seq1 = seqs[[1]]
seq1 = toupper(seq1[1:91])
seq1RC = toupper(rev(comp(seq1)))
c2s(seq1) #sense strand
c2s(seq1RC) #antisense stand
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